Wiki cluster CEAB (antic cblabdoc) - public
https://tic.ceab.csic.es/cblabdoc/
2026-08-24T08:01:15+00:00Wiki cluster CEAB (antic cblabdoc)
https://tic.ceab.csic.es/cblabdoc/
https://tic.ceab.csic.es/cblabdoc/lib/exe/fetch.php?media=wiki:dokuwiki.svgtext/html2026-01-28T15:11:32+00:00Anonymous (anonymous@undisclosed.example.com)add_gitignore
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:add_gitignore&rev=1769613092&do=diff
Adding .gitignore
You can add a .gitignore file anytime to stop tracking ignored files. This keeps your repository clean and lightweight, only tracking code and important configs, not heavy data or temporary files.
.
1️⃣ Before committing anything (best practice)text/html2025-11-01T16:38:17+00:00Anonymous (anonymous@undisclosed.example.com)altes-tarifes-facturacio
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:altes-tarifes-facturacio&rev=1762015097&do=diff
Altes, tarifes i facturació del servei
(aquí ja es pot editar tot en markdown)...text/html2026-01-28T15:09:25+00:00Anonymous (anonymous@undisclosed.example.com)git_config
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:git_config&rev=1769612965&do=diff
Preliminary configuration
1. Remote configuration
Add ssh keys to your github account
2. Local configuration
If you get the following message
~/your_git_folder$ git commit -m "initial commit"
*** Please tell me who you are.
Run
git config --global user.email "you@example.com"
git config --global user.name "Your Name"
to set your account's default identity.
Omit --global to set the identity only in this repository.
fatal: unable to auto-detect email address (got 'culex@hemalert.(n…text/html2026-08-20T08:28:46+00:00Anonymous (anonymous@undisclosed.example.com)github_basics
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:github_basics&rev=1787214526&do=diff
GitHub basics
* Preliminary configuration
* Create new repository
* Adding .gitignore
* Issuestext/html2025-11-01T16:29:04+00:00Anonymous (anonymous@undisclosed.example.com)introduccio
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:introduccio&rev=1762014544&do=diff
Introducció a l'ús del cluster
(editat per últim cop per Xavier Roijals. 01 de novembre de 2025).
Nova direcció accés per ssh al cluster.
la direcció per accedir al cluster ha canviat: ara és cluster.ceab.csic.es. Per tant, per connectar-se caldrà fer:__*__text/html2026-08-20T13:05:12+00:00Anonymous (anonymous@undisclosed.example.com)issues
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:issues&rev=1787231112&do=diff
Using GitHub Issues for Cluster CEAB Communication
GitHub Issues is the recommended channel for reporting problems, suggesting improvements, and asking questions related to the cluster.
Using GitHub Issues helps us to:
* Centralize communication.text/html2026-01-29T15:16:14+00:00Anonymous (anonymous@undisclosed.example.com)move2
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:move2&rev=1769699774&do=diff
move2 (Movebank)
These instructions describe how to use the R package move2 on the HPC cluster:
*
*
----------
Using move2 on interactive sessions
On this system, credentials are stored per R session using the keyring env backend (expected behaviour on headless nodes).text/html2026-01-28T15:10:31+00:00Anonymous (anonymous@undisclosed.example.com)new_repo
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:new_repo&rev=1769613031&do=diff
Create new repository
You want to take a local folder and push it to a new GitHub repository. Here’s a clear step-by-step guide:
1️⃣ Create a new repository on GitHub
* Go to GitHub and log in.
* Click the + icon → New repository.
* Give it a nametext/html2025-11-01T16:38:45+00:00Anonymous (anonymous@undisclosed.example.com)programes-environments-db
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:programes-environments-db&rev=1762015125&do=diff
Programes, environments, base de dades instal·lades
(a partit d'aquí ja es pot editar en markdown)text/html2026-01-28T15:18:16+00:00Anonymous (anonymous@undisclosed.example.com)r_packages
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:r_packages&rev=1769613496&do=diff
R packages
* move2 (Movebank)text/html2026-03-06T13:49:21+00:00Anonymous (anonymous@undisclosed.example.com)system_load
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:system_load&rev=1772804961&do=diff
Check system load
💡 Tip: to get a quick view of not-allocated resources per node (CPU and memory)
(this is not a standard slurm function; it is an ad-hoc function implemented in /usr/local/bin)
$sfreeres
You’ll see something like:
CPU Mem (GiB) GPU
Node (Free/Ttl) (Free/Ttl) (Free/Ttl)
------------------------------------------------
node1 16/16 153/153 0/0
node2 16/16 153/153 0/0
node3 …