Wiki cluster CEAB (antic cblabdoc) - public
https://tic.ceab.csic.es/cblabdoc/
2026-05-20T07:17:02+00:00Wiki cluster CEAB (antic cblabdoc)
https://tic.ceab.csic.es/cblabdoc/
https://tic.ceab.csic.es/cblabdoc/lib/exe/fetch.php?media=wiki:dokuwiki.svgtext/html2026-01-28T15:11:32+00:00Anonymous (anonymous@undisclosed.example.com)add_gitignore
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:add_gitignore&rev=1769613092&do=diff
Adding .gitignore
You can add a .gitignore file anytime to stop tracking ignored files. This keeps your repository clean and lightweight, only tracking code and important configs, not heavy data or temporary files.
.
1️⃣ Before committing anything (best practice)text/html2025-11-01T16:38:17+00:00Anonymous (anonymous@undisclosed.example.com)altes-tarifes-facturacio
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:altes-tarifes-facturacio&rev=1762015097&do=diff
Altes, tarifes i facturació del servei
(aquí ja es pot editar tot en markdown)...text/html2026-01-28T15:09:25+00:00Anonymous (anonymous@undisclosed.example.com)git_config
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:git_config&rev=1769612965&do=diff
Preliminary configuration
1. Remote configuration
Add ssh keys to your github account
2. Local configuration
If you get the following message
~/your_git_folder$ git commit -m "initial commit"
*** Please tell me who you are.
Run
git config --global user.email "you@example.com"
git config --global user.name "Your Name"
to set your account's default identity.
Omit --global to set the identity only in this repository.
fatal: unable to auto-detect email address (got 'culex@hemalert.(n…text/html2026-01-28T15:08:22+00:00Anonymous (anonymous@undisclosed.example.com)github_basics
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:github_basics&rev=1769612902&do=diff
GitHib basics
* Preliminary configuration
* Create new repository
* Adding .gitignore
* Issuestext/html2025-11-01T16:29:04+00:00Anonymous (anonymous@undisclosed.example.com)introduccio
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:introduccio&rev=1762014544&do=diff
Introducció a l'ús del cluster
(editat per últim cop per Xavier Roijals. 01 de novembre de 2025).
Nova direcció accés per ssh al cluster.
la direcció per accedir al cluster ha canviat: ara és cluster.ceab.csic.es. Per tant, per connectar-se caldrà fer:__*__text/html2026-01-29T15:16:14+00:00Anonymous (anonymous@undisclosed.example.com)move2
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:move2&rev=1769699774&do=diff
move2 (Movebank)
These instructions describe how to use the R package move2 on the HPC cluster:
*
*
----------
Using move2 on interactive sessions
On this system, credentials are stored per R session using the keyring env backend (expected behaviour on headless nodes).text/html2026-01-28T15:10:31+00:00Anonymous (anonymous@undisclosed.example.com)new_repo
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:new_repo&rev=1769613031&do=diff
Create new repository
You want to take a local folder and push it to a new GitHub repository. Here’s a clear step-by-step guide:
1️⃣ Create a new repository on GitHub
* Go to GitHub and log in.
* Click the + icon → New repository.
* Give it a nametext/html2025-11-01T16:38:45+00:00Anonymous (anonymous@undisclosed.example.com)programes-environments-db
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:programes-environments-db&rev=1762015125&do=diff
Programes, environments, base de dades instal·lades
(a partit d'aquí ja es pot editar en markdown)text/html2026-01-28T15:18:16+00:00Anonymous (anonymous@undisclosed.example.com)r_packages
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:r_packages&rev=1769613496&do=diff
R packages
* move2 (Movebank)text/html2026-03-06T13:49:21+00:00Anonymous (anonymous@undisclosed.example.com)system_load
https://tic.ceab.csic.es/cblabdoc/doku.php?id=public:system_load&rev=1772804961&do=diff
Check system load
💡 Tip: to get a quick view of not-allocated resources per node (CPU and memory)
(this is not a standard slurm function; it is an ad-hoc function implemented in /usr/local/bin)
$sfreeres
You’ll see something like:
CPU Mem (GiB) GPU
Node (Free/Ttl) (Free/Ttl) (Free/Ttl)
------------------------------------------------
node1 16/16 153/153 0/0
node2 16/16 153/153 0/0
node3 …