Computational Biology Lab Wiki

We have installed the program SEQenv version 1.30. It's intalled in a virtual environment of python 2.7.

To work with SEQenv users must activate the virtual environment first. Example of a job script:

#!/bin/bash

source /home/soft/virtenvs/python2/bin/activate

/home/usuaris/xavier.roijals/proves/provaSeqenv2/seqenvMonegros98.sh

deactivate

This script will let you connect to the virtual environment and execute the example script seqenvMonegros.sh. We can see in this script:

```

The lines “source /home/soft/virtenvs/python2/bin/activate” and “deactivate” are needed to activate the python virtual environment (and deactivate it when the work is finished).